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  1. IGB
  2. IGBF-1200

remove pollen and cyto QL sites and add http://lorainelab-quickload.scidas.org/rnaseq RNA-Seq QL site

        Details

        • Story Points:
          0.25
        • Sprint:
          Fall 2017, B - Summer 2018

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            relates to

            Improvement - An improvement or enhancement to an existing feature or task. IGBF-1195 Add soybean RNA-Seq quickload site to IGB

            • Major - Major loss of function.
            • Closed

            Bug - A problem which impairs or prevents the functions of the product. IGBF-1206 Duplicate QL sites appear in new versions of IGB with changed default QL sites

            • Major - Major loss of function.
            • Closed

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              ann.loraine Ann Loraine added a comment - - edited

              edit

              core/igb-preferences/src/main/resources/igbDefaultPrefs.json
              core/igb-preferences/src/test/resources/igbDefaultPrefs.json

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              ann.loraine Ann Loraine added a comment - - edited edit core/igb-preferences/src/main/resources/igbDefaultPrefs.json core/igb-preferences/src/test/resources/igbDefaultPrefs.json
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              ann.loraine Ann Loraine added a comment - - edited

              To test:

              1) Visit Arabidopsis genome
              2) Observe a new folder named "RNA-Seq" in the Data Sources tab
              3) Observe old folders "Pollen" and "Cyto" are gone

              Investigate:

              IGB QL data sources may be saved in IGB preferences. Updating a default QL data source loaded from IGB preferences may not update correctly, leading to duplicate or corrupt data sources listed in the IGB data sources Preferences tab.

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              ann.loraine Ann Loraine added a comment - - edited To test: 1) Visit Arabidopsis genome 2) Observe a new folder named "RNA-Seq" in the Data Sources tab 3) Observe old folders "Pollen" and "Cyto" are gone Investigate: IGB QL data sources may be saved in IGB preferences. Updating a default QL data source loaded from IGB preferences may not update correctly, leading to duplicate or corrupt data sources listed in the IGB data sources Preferences tab.
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              ann.loraine Ann Loraine added a comment - - edited

              See branch IGBF-1200 on https://bitbucket.org/aloraine/alorainefork

              NOTE: Installer available from downloads link was built from IGBF-1200

              You can download this for testing.

              Show
              ann.loraine Ann Loraine added a comment - - edited See branch IGBF-1200 on https://bitbucket.org/aloraine/alorainefork NOTE: Installer available from downloads link was built from IGBF-1200 You can download this for testing.
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              mason Mason Meyer (Inactive) added a comment -

              My testing confirms that this story is resolved. There is a new folder in Arabidopsis called "RNA-Seq" which is coming from http://lorainelab-quickload.scidas.org/rnaseq. The data from the folder is loading as expected and the "Pollen" and "Cyto" folders are now gone. Since this issue is resolved, it will now be closed.

              Show
              mason Mason Meyer (Inactive) added a comment - My testing confirms that this story is resolved. There is a new folder in Arabidopsis called "RNA-Seq" which is coming from http://lorainelab-quickload.scidas.org/rnaseq . The data from the folder is loading as expected and the "Pollen" and "Cyto" folders are now gone. Since this issue is resolved, it will now be closed.

                People

                • Assignee:
                  mason Mason Meyer (Inactive)
                  Reporter:
                  ann.loraine Ann Loraine
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                  • Created:
                    Updated:
                    Resolved: