Details
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Type: Improvement
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.1.0 Major Release
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Labels:
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Story Points:10
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Sprint:B - Summer 2018, Summer 2018 Part 2, Summer 2018 Part 3, Fall 2018 1, Fall 2018 Sprint 2, Fall 2018 Sprint 3, Fall 2018 Sprint 4
Description
IGB should show soft-clipped bases in BAM files.
Attachments
Issue Links
- relates to
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IGBF-1440 Fix soft-clipping glyph render
- Closed
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IGBF-1441 Fix Depth Graph (Start) Soft-clip coordinates
- Closed
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IGBF-1443 Implement Depth Graph (Soft-clip)
- Closed
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IGBF-1422 Find example data sets where soft clipping reveals polymorphisms
- Closed
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IGBF-1442 Preserve soft-clip settings between sessions
- Closed
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IGBF-1447 Implement selectable deletion glyph
- To-Do
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IGBF-1222 Check if IGB shows soft-clipped bases from read alignments correctly
- Closed
Tested using master branch of Loraine Lab and also using local build on Windows.
The functionality is working correctly and the menu options are also easy to understand now. The code is not breaking anywhere.